Potential energy functions for atomic-level simulations of water and organic and biomolecular systems.
نویسندگان
چکیده
An overview is provided on the development and status of potential energy functions that are used in atomic-level statistical mechanics and molecular dynamics simulations of water and of organic and biomolecular systems. Some topics that are considered are the form of force fields, their parameterization and performance, simulations of organic liquids, computation of free energies of hydration, universal extension for organic molecules, and choice of atomic charges. The discussion of water models covers some history, performance issues, and special topics such as nuclear quantum effects.
منابع مشابه
Energy Study at Different Temperatures for Active Site of Azurin in Water, Ethanol, Methanol and Gas Phase by Monte Carlo Simulations
The interaction between the solute and the solsent molecules play a crucial role in understanding the various molecular processes involved in chemistry and biochemistry, so in this work the potential energy of active site of azurin have been calculated in solvent by the Monte Carlo simulation. In this paper we present quantitative results of Monte Carlo calculations of potential energies of ...
متن کاملPassive Energy Air-to-Water Heat Pipe Based Heat Exchanger and its Potential of Air Pre-cooling in Air Conditioning Systems for Iran Climate
Air pre-cooling equipment is normally being employed in air-conditioning systems for pre-cooling the ambient outdoor air to enhance the air-conditioning systems performance. In this study, the potential of a passive water-to-air heat pipe based heat exchanger (HPHEX) for air pre-cooling purpose in air-conditioning systems for the high cooling load demanding regions of Iran was investigated. To ...
متن کاملA brief discussion on energy use and greenhouse gas emmision in organic farming
Organic farming has become increasingly popular in the world. This is mostly attributed toescalating consumer concerns over the impacts of pesticides and chemical fertilizers on humanhealth as well as growing concerns over environmental pollution derived from modernagricultural practices, such as rising greenhouse gas emissions and water contaminations. Butdoes organic farming actually displace...
متن کاملModeling, Optimization and exergoeconomic analysis a multiple energy production system based on solar Energy, Wind Energy and Ocean Thermal Energy Conversion (OTEC) in the onshore region
In the present study, investigated an energy production system using three types of renewable energy: solar, wind and ocean thermal energy with climatic conditions and close to areas with high potential for the OTEC system, Has a good position in terms of wind speed and solar radiation, used them as energy sources. The proposed system is designed and evaluated based on the total daily electrici...
متن کاملEnergy study at different solvents for potassium Channel Protein by Monte Carlo, Molecular and Langevin Dynamics Simulations
Potassium Channels allow potassium flux and are essential for the generation of electric current acrossexcitable membranes. Potassium Channels are also the targets of various intracellular controlmechanisms; such that the suboptimal regulation of channel function might be related to pathologicalconditions. Realistic studies of ion current in biologic channels present a major challenge for compu...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
عنوان ژورنال:
- Proceedings of the National Academy of Sciences of the United States of America
دوره 102 19 شماره
صفحات -
تاریخ انتشار 2005